Technology

Discover scalable, instrument-free single cell sequencing technology from Parse Bioscience

Technology Overview


Resources

Explore our collection of resources to learn more about technology and its applications from leading researchers

Resources Overview

Company

Providing researchers single cell sequencing with unprecedented scale and ease

About Parse

Customer Datasets

Using Evercode WT to Characterize a Novel Organoid Model for Studying Bovine Respiratory Disease


Bovine respiratory disease (BRD) is the leading cause of morbidity and mortality in feedlot cattle with bovine herpesvirus-1 (BHV-1) being the most common source. Currently, research on BHV-1 is hampered by the lack of suitable models for infection and drug testing.

In this study, we established a novel bovine tracheal organoid culture grown in a basement membrane extract type 2 (BME2) matrix and compared it with the air–liquid interface (ALI) culture system. After differentiation, the matrix-embedded organoids developed beating cilia and demonstrated a transcriptomic profile similar to the ALI culture system. The matrix-embedded organoids were highly susceptible to BHV-1 infection and responded to immune stimulation by Pam2Cys, resulting in robust cytokine production and tracheal antimicrobial peptide mRNA upregulation.

Treatment of bovine tracheal organoid cultures with Pam2Cys was not sufficient to inhibit viral infection or replication, suggesting that cell-intrinsic antiviral mechanisms induced by Pam2Cys do not inhibit viral replication when activated in isolation. This implicates a role for the non-epithelial cellular microenvironment in vivo, as the bovine tracheal culture comprises only epithelial cells.

Sample Table

SampleMaterialProcessed
1UndifferentiatedCells
2BME2 OrganoidCells
3ALI OrganoidCells
4Treated ALI OrganoidCells
Products: WT Mini
Tissue Type: Bovine Tracheal Organoids

"We characterized extraordinary cell type diversity in our organoid model."

-Pin Shie Quah, Jackson Laboratory, University of Melbourne
-Bang M. Tran, Vincan Laboratory, University of Melbourne
-Vincent D.A. Corbin, Coin Laboratory, University of Melbourne

We're your partners in single cell

Reach out for a quote or for help planning your next experiment.